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Journal of Cognitive Neuroscience

Monthly
160 pp. per issue
8 1/2 x 11, illustrated
Founded: 1989
ISSN 0898-929X
E-ISSN 1530-8898
2008 ISI Impact Factor: 4.867

Journal of Cognitive Neuroscience

November 2007, Vol. 19, No. 11, Pages 1735-1752
Posted Online October 24, 2007.
(doi:10.1162/jocn.2007.19.11.1735)
© 2007 Massachusetts Institute of Technology
Theoretical, Statistical, and Practical Perspectives on Pattern-based Classification Approaches to the Analysis of Functional Neuroimaging Data

Alice J. O'Toole, Fang Jiang, Hervé Abdi, Nils Pénard, Joseph P. Dunlop, and Marc A. Parent

The University of Texas at Dallas

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Abstract

The goal of pattern-based classification of functional neuroimaging data is to link individual brain activation patterns to the experimental conditions experienced during the scans. These “brain-reading” analyses advance functional neuroimaging on three fronts. From a technical standpoint, pattern-based classifiers overcome fatal f laws in the status quo inferential and exploratory multivariate approaches by combining pattern-based analyses with a direct link to experimental variables. In theoretical terms, the results that emerge from pattern-based classifiers can offer insight into the nature of neural representations. This shifts the emphasis in functional neuroimaging studies away from localizing brain activity toward understanding how patterns of brain activity encode information. From a practical point of view, pattern-based classifiers are already well established and understood in many areas of cognitive science. These tools are familiar to many researchers and provide a quantitatively sound and qualitatively satisfying answer to most questions addressed in functional neuroimaging studies. Here, we examine the theoretical, statistical, and practical underpinnings of pattern-based classification approaches to functional neuroimaging analyses. Pattern-based classification analyses are well positioned to become the standard approach to analyzing functional neuroimaging data.

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